PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2DL_362A1F535.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 70aa    MW: 8363.38 Da    PI: 9.6785
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2DL_362A1F535.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.13.6e-182470245
                           --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSST CS
                   WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedp 45
                           +Dg +WrKYGqKe+++s+++++Y+rCt++   +C+++++ +r+++dp
  Traes_2DL_362A1F535.1 24 EDGQTWRKYGQKEIQNSKHSKAYFRCTHKydqQCMARRQAQRCDDDP 70
                           8***************************99999***********986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-171470IPR003657WRKY domain
SuperFamilySSF1182904.84E-181770IPR003657WRKY domain
PROSITE profilePS5081115.9161870IPR003657WRKY domain
SMARTSM007748.7E-162370IPR003657WRKY domain
PfamPF031065.1E-152469IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
NIFFLGRCRT QDSSVVTKNM KSLEDGQTWR KYGQKEIQNS KHSKAYFRCT HKYDQQCMAR  60
RQAQRCDDDP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3976133e-92EF397613.1 Triticum aestivum cultivar Nongda 3338 WRKY45 transcription factor (WRKY45) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004962450.12e-29PREDICTED: probable WRKY transcription factor 70
SwissprotQ9SKD91e-16WRK46_ARATH; Probable WRKY transcription factor 46
TrEMBLW5BT123e-47W5BT12_WHEAT; Uncharacterized protein
STRINGSi022702m7e-29(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.17e-12WRKY DNA-binding protein 46
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]